bioinformer v. 1.02: Software for Demonstrating Bioinformatics Concepts
This version of bioinformer
accompanies the book
Bioinformatics; an Evolutionary Approach
by Bernhard Haubold
and Thomas Wiehe (2006, Birkhäuser). It contains demo programs on
the following topics:
- Alignment
- Protein Substitution Matrices
- Number of Alignments
- Pairwise Alignment
- Match
- String Matching
- Suffix Tree
- Repeat Searching
- Hash Table
- Dotplot
- Probability
- Evolution
- Phylogeny
- Drift
- Wright-Fisher
- Coalescent
The book also contains tutorials on each one of these modules.
The software can be downloaded from
here.
Bernhard Haubold
2013-08-29